Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RAR7_PETMAL-2-hydroxyglutarate dehydrogenase. (421 aa)    
Predicted Functional Partners:
S4RXU5_PETMA
Citrate synthase; Belongs to the citrate synthase family.
    
 0.873
S4REV5_PETMA
D-2-hydroxyglutarate dehydrogenase.
      
 0.862
S4R6I4_PETMA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.846
S4RTF2_PETMA
Glutamine synthetase.
  
 
 0.824
S4R518_PETMA
ANK_REP_REGION domain-containing protein.
     
  0.800
S4RS50_PETMA
ANK_REP_REGION domain-containing protein.
     
  0.800
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 
 0.700
S4R7Q9_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 
 0.692
S4RM59_PETMA
FGGY carbohydrate kinase domain containing.
  
 
 0.692
S4RMC5_PETMA
ATPase family AAA domain containing 2B.
  
 
 0.692
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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