S4RAS1_PETMA protein (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NT5C1A	PNP	ENSPMAP00000005294	ENSPMAP00000007353	Uncharacterized protein.	Purine nucleoside phosphorylase.	0.937
NT5C1A	PNP-2	ENSPMAP00000005294	ENSPMAP00000008520	Uncharacterized protein.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.937
NT5C1A	S4R9A4_PETMA	ENSPMAP00000005294	ENSPMAP00000001785	Uncharacterized protein.	Zgc:110540.	0.913
NT5C1A	S4RAS1_PETMA	ENSPMAP00000005294	ENSPMAP00000002302	Uncharacterized protein.	HD domain containing 2.	0.901
NT5C1A	S4RF50_PETMA	ENSPMAP00000005294	ENSPMAP00000003832	Uncharacterized protein.	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.	0.910
NT5C1A	S4RHX6_PETMA	ENSPMAP00000005294	ENSPMAP00000004808	Uncharacterized protein.	Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.	0.904
NT5C1A	S4RKX3_PETMA	ENSPMAP00000005294	ENSPMAP00000005856	Uncharacterized protein.	Guanylate kinase 1.	0.928
NT5C1A	S4RMZ5_PETMA	ENSPMAP00000005294	ENSPMAP00000006581	Uncharacterized protein.	Guanylate kinase 1.	0.928
NT5C1A	S4RQU7_PETMA	ENSPMAP00000005294	ENSPMAP00000007583	Uncharacterized protein.	Thymidylate synthetase.	0.949
NT5C1A	S4RYW4_PETMA	ENSPMAP00000005294	ENSPMAP00000010405	Uncharacterized protein.	Deoxyuridine triphosphatase.	0.906
PNP	NT5C1A	ENSPMAP00000007353	ENSPMAP00000005294	Purine nucleoside phosphorylase.	Uncharacterized protein.	0.937
PNP	PNP-2	ENSPMAP00000007353	ENSPMAP00000008520	Purine nucleoside phosphorylase.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.902
PNP	S4R9A4_PETMA	ENSPMAP00000007353	ENSPMAP00000001785	Purine nucleoside phosphorylase.	Zgc:110540.	0.919
PNP	S4RAS1_PETMA	ENSPMAP00000007353	ENSPMAP00000002302	Purine nucleoside phosphorylase.	HD domain containing 2.	0.970
PNP	S4RF50_PETMA	ENSPMAP00000007353	ENSPMAP00000003832	Purine nucleoside phosphorylase.	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.	0.855
PNP-2	NT5C1A	ENSPMAP00000008520	ENSPMAP00000005294	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Uncharacterized protein.	0.937
PNP-2	PNP	ENSPMAP00000008520	ENSPMAP00000007353	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Purine nucleoside phosphorylase.	0.902
PNP-2	S4R9A4_PETMA	ENSPMAP00000008520	ENSPMAP00000001785	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Zgc:110540.	0.919
PNP-2	S4RAS1_PETMA	ENSPMAP00000008520	ENSPMAP00000002302	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	HD domain containing 2.	0.970
PNP-2	S4RF50_PETMA	ENSPMAP00000008520	ENSPMAP00000003832	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.	0.855