STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RAZ5_PETMAHistone H2A; Belongs to the histone H2A family. (130 aa)    
Predicted Functional Partners:
S4R848_PETMA
Uncharacterized protein.
    
 0.994
ENSPMAP00000010967
annotation not available
 
 0.774
ENSPMAP00000011006
annotation not available
 
 0.774
ENSPMAP00000011011
annotation not available
 
 0.774
ENSPMAP00000011016
annotation not available
 
 0.774
ENSPMAP00000011118
annotation not available
 
 0.774
S4RB04_PETMA
Histone H2B; Belongs to the histone H2B family.
 
 0.772
S4RB03_PETMA
Histone H2B; Belongs to the histone H2B family.
 
 0.772
S4RJC5_PETMA
Histone H2B; Belongs to the histone H2B family.
 
 0.772
S4S0J6_PETMA
Histone domain-containing protein; Belongs to the histone H2B family.
 
 0.771
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.