STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RBA7_PETMAUncharacterized protein. (237 aa)    
Predicted Functional Partners:
S4RAK2_PETMA
Uncharacterized protein.
 
 
0.681
GNB5
Guanine nucleotide binding protein (G protein), beta 5b.
    
  0.655
GNG13
Guanine nucleotide binding protein (G protein), gamma 13b.
    
  0.630
LIPT2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.611
S4RVY4_PETMA
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.588
GNB3-2
WD_REPEATS_REGION domain-containing protein.
    
  0.587
S4RWD0_PETMA
WD_REPEATS_REGION domain-containing protein.
    
  0.587
S4R711_PETMA
Uncharacterized protein.
    
 0.582
S4S0X0_PETMA
Potassium inwardly-rectifying channel, subfamily J, member 12b.
  
 
0.581
S4S158_PETMA
Potassium inwardly-rectifying channel, subfamily J, member 16.
  
 
0.581
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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