STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RBH6_PETMAFatty acid binding protein 7, brain, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (131 aa)    
Predicted Functional Partners:
S4RTR1_PETMA
Retinoid X receptor, gamma b.
   
 0.611
S4RE10_PETMA
Lymphocyte cytosolic protein 1 (L-plastin).
      
 0.481
S4RKE0_PETMA
Family with sequence similarity 149 member B1.
    
 0.454
S4RQU2_PETMA
Beta-hexosaminidase.
    
 0.454
S4RHZ3_PETMA
Fatty acid binding protein 10b, liver basic.
      
 0.449
S4R4B9_PETMA
Nuclear receptor subfamily 2, group F, member 1b.
    
 0.447
S4RHV2_PETMA
Aldo_ket_red domain-containing protein.
    
  0.404
S4RJ11_PETMA
Aldo_ket_red domain-containing protein.
    
  0.404
S4RT73_PETMA
Aldo-keto reductase family 1, member A1b (aldehyde reductase).
    
  0.404
S4RUX3_PETMA
Aldo_ket_red domain-containing protein.
    
  0.404
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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