STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RBJ2_PETMAUncharacterized protein. (1747 aa)    
Predicted Functional Partners:
S4R6G2_PETMA
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 0.610
S4RN67_PETMA
Na_Ca_ex domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 0.610
S4RE61_PETMA
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
   
 0.607
S4RSY8_PETMA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.502
S4RAJ7_PETMA
Uncharacterized protein.
   
 
 0.493
S4RLT0_PETMA
Syndecan domain-containing protein.
     
 0.484
S4RPI0_PETMA
Hexosyltransferase.
     
 0.464
S4RYW2_PETMA
Hexosyltransferase.
     
 0.413
S4S1N7_PETMA
Uncharacterized protein.
     
 0.413
S4R8A7_PETMA
Uncharacterized protein.
    
 
 0.400
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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