STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RC75_PETMADenticleless E3 ubiquitin protein ligase homolog (Drosophila). (307 aa)    
Predicted Functional Partners:
S4RVX6_PETMA
Damage-specific DNA binding protein 1.
    
 0.997
S4RNZ6_PETMA
Cullin 4B; Belongs to the cullin family.
    
 0.995
S4RTM7_PETMA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.985
S4RNJ7_PETMA
WD repeat and HMG-box DNA binding protein 1.
   
  
 0.980
S4RWL2_PETMA
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
  
 0.974
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.963
S4RRM4_PETMA
Exonuclease 1.
   
 
 0.929
S4RVW2_PETMA
Minichromosome maintenance 10 replication initiation factor.
   
  
 0.926
S4RGA4_PETMA
DNA primase subunit 2.
   
  
 0.842
CHEK1
Checkpoint kinase 1.
   
 
 0.840
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.