Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4RC97_PETMAPeptidase S1 domain-containing protein. (148 aa)    
Predicted Functional Partners:
S4RV87_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.603
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.601
S4RVC1_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.601
S4RVG6_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.596
S4RVG1_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.593
S4RVH5_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.592
S4R9Q9_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.587
S4RA15_PETMA
Carboxypeptidase A5.
   
 
 0.506
S4RMK2_PETMA
Uncharacterized protein.
    
 0.504
S4RVX9_PETMA
WD repeat domain 90.
    
 0.504
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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