STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNT1Potassium channel subfamily T 2a. (426 aa)    
Predicted Functional Partners:
S4RL33_PETMA
Potassium channel subfamily T 2b.
 
     0.919
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
    
 0.869
S4RHH3_PETMA
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.689
S4RQQ4_PETMA
Dymeclin.
      
 0.628
S4R9C4_PETMA
Uncharacterized protein.
    
 0.627
S4RHR0_PETMA
Protein kinase domain-containing protein.
    
 0.627
S4RI01_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.627
S4RXT1_PETMA
Small-conductance calcium-activated potassium channel 2a.
     
 0.572
S4RGW6_PETMA
Uncharacterized protein.
     
 0.540
S4RVY3_PETMA
CaMBD domain-containing protein.
     
 0.540
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.