STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RCD8_PETMARibonuclease P 21 subunit. (87 aa)    
Predicted Functional Partners:
S4RA16_PETMA
Uncharacterized protein.
   
 0.999
S4RNX0_PETMA
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.999
POP1
Uncharacterized protein.
    
 0.998
S4RK35_PETMA
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.983
S4S075_PETMA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.983
S4RLX2_PETMA
Alba domain-containing protein.
   
 0.982
CENPS-CORT
CENPS-CORT readthrough.
    
 0.925
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
     
 0.909
S4RJV4_PETMA
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.905
S4RVL7_PETMA
Ribonuclease P/MRP 40 subunit.
    
 0.904
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.