STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RCH9_PETMAMajor facilitator superfamily domain containing 10. (472 aa)    
Predicted Functional Partners:
S4R7T3_PETMA
PlsC domain-containing protein.
 
      0.890
S4RQU4_PETMA
MFS domain-containing protein.
  
   
 0.627
S4RMP3_PETMA
Major facilitator superfamily domain containing 6a.
      
 0.558
S4R4S3_PETMA
Major facilitator superfamily domain containing 11.
      
 0.554
S4RUB6_PETMA
SVOP-like.
   
  
 0.506
S4RW20_PETMA
Solute carrier family 46 member 2.
   
  
 0.500
S4RSN7_PETMA
N-methylpurine DNA glycosylase.
      
 0.477
S4RE49_PETMA
Major facilitator superfamily domain containing 13A.
      
 0.472
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.