S4RD15_PETMA protein (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DXO	POLR2B	ENSPMAP00000008986	ENSPMAP00000001304	Decapping exoribonuclease.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.812
DXO	S4RC84_PETMA	ENSPMAP00000008986	ENSPMAP00000002816	Decapping exoribonuclease.	5'-3' exoribonuclease 2.	0.995
DXO	S4RD15_PETMA	ENSPMAP00000008986	ENSPMAP00000003097	Decapping exoribonuclease.	CCDC66 domain-containing protein.	0.723
DXO	S4RJB6_PETMA	ENSPMAP00000008986	ENSPMAP00000005298	Decapping exoribonuclease.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.858
DXO	S4RJW7_PETMA	ENSPMAP00000008986	ENSPMAP00000005500	Decapping exoribonuclease.	RPOL4c domain-containing protein.	0.565
DXO	S4RTJ4_PETMA	ENSPMAP00000008986	ENSPMAP00000008534	Decapping exoribonuclease.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.812
DXO	S4RUF9_PETMA	ENSPMAP00000008986	ENSPMAP00000008849	Decapping exoribonuclease.	CCDC66 domain-containing protein.	0.723
POLR2B	DXO	ENSPMAP00000001304	ENSPMAP00000008986	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Decapping exoribonuclease.	0.812
POLR2B	S4RA90_PETMA	ENSPMAP00000001304	ENSPMAP00000002121	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.819
POLR2B	S4RC84_PETMA	ENSPMAP00000001304	ENSPMAP00000002816	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	5'-3' exoribonuclease 2.	0.845
POLR2B	S4RD15_PETMA	ENSPMAP00000001304	ENSPMAP00000003097	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CCDC66 domain-containing protein.	0.722
POLR2B	S4RJB6_PETMA	ENSPMAP00000001304	ENSPMAP00000005298	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.999
POLR2B	S4RJW7_PETMA	ENSPMAP00000001304	ENSPMAP00000005500	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOL4c domain-containing protein.	0.998
POLR2B	S4RR07_PETMA	ENSPMAP00000001304	ENSPMAP00000007643	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.873
POLR2B	S4RTJ4_PETMA	ENSPMAP00000001304	ENSPMAP00000008534	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.900
POLR2B	S4RUF9_PETMA	ENSPMAP00000001304	ENSPMAP00000008849	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CCDC66 domain-containing protein.	0.722
S4RA90_PETMA	POLR2B	ENSPMAP00000002121	ENSPMAP00000001304	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.819
S4RA90_PETMA	S4RC84_PETMA	ENSPMAP00000002121	ENSPMAP00000002816	Uncharacterized protein.	5'-3' exoribonuclease 2.	0.447
S4RA90_PETMA	S4RD15_PETMA	ENSPMAP00000002121	ENSPMAP00000003097	Uncharacterized protein.	CCDC66 domain-containing protein.	0.613
S4RA90_PETMA	S4RJB6_PETMA	ENSPMAP00000002121	ENSPMAP00000005298	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.814