Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RD54_PETMAUncharacterized protein. (116 aa)    
Predicted Functional Partners:
S4RUA6_PETMA
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 0.986
S4R5C4_PETMA
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.984
S4RQE0_PETMA
Retinoblastoma binding protein 5.
   
 0.955
S4RP24_PETMA
WD repeat and SOCS box containing 1.
    
 0.953
S4RCH0_PETMA
KAT8 regulatory NSL complex subunit 3.
   
 0.950
S4RED3_PETMA
KAT8 regulatory NSL complex subunit 2.
    
 0.937
S4RD46_PETMA
Uncharacterized protein.
 
     0.931
S4RAI7_PETMA
Uncharacterized protein.
   
 0.925
S4RHG8_PETMA
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.915
S4RRC4_PETMA
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.915
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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