STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR1-2WD repeat domain 1. (616 aa)    
Predicted Functional Partners:
S4RH85_PETMA
Uncharacterized protein.
   
 0.812
ACTG2
Actin gamma 2, smooth muscle.
   
 0.812
ACTB
Beta-actin.
   
 0.812
S4R9G5_PETMA
Actin related protein 3; Belongs to the actin family.
   
 0.785
S4REN8_PETMA
Uncharacterized protein; Belongs to the actin family.
   
 0.785
S4RX51_PETMA
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
   
 
 0.736
S4REJ9_PETMA
SH3 and cysteine rich domain.
   
 0.721
S4REU7_PETMA
Phorbol-ester/DAG-type domain-containing protein.
   
 0.721
S4RMQ9_PETMA
Actin related protein 10; Belongs to the actin family.
   
 0.721
S4RWG8_PETMA
Nephronophthisis 1.
   
 0.721
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.