STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RD73_PETMAMitochondrial ribosomal protein L35. (104 aa)    
Predicted Functional Partners:
S4RBS3_PETMA
Mitochondrial ribosomal protein L15.
   
   0.986
MRPS14
Mitochondrial ribosomal protein S14.
   
   0.971
S4RTH4_PETMA
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.971
MRPL51
Mitochondrial ribosomal protein L51.
   
   0.967
S4S0I0_PETMA
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.967
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.965
S4RIX3_PETMA
Mitochondrial ribosomal protein L30.
   
 
 0.960
MRPL49
Mitochondrial ribosomal protein L49.
   
   0.958
S4R6W8_PETMA
Zgc:171480.
   
   0.958
S4R9B2_PETMA
Mitochondrial ribosomal protein S30.
   
 
 0.957
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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