STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDA6_PETMAAH domain-containing protein. (281 aa)    
Predicted Functional Partners:
S4RAP8_PETMA
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.913
S4RF79_PETMA
Uncharacterized protein.
   
 0.639
S4RQ50_PETMA
Rac family small GTPase 2.
   
 0.639
S4RX54_PETMA
Rac family small GTPase 1.
   
 0.639
S4S0T0_PETMA
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.632
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.632
S4R642_PETMA
ADP-ribosylation factor-like 15b.
    
 0.597
RHOU
Ras homolog family member U.
   
 0.551
RHOU-2
Ras homolog family member U.
   
 0.551
RHOU-3
Ras homolog family member U.
   
 0.551
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.