Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4RDB6_PETMALaminin N-terminal domain-containing protein. (298 aa)    
Predicted Functional Partners:
S4S1M1_PETMA
Leucine rich repeat containing 4Ba.
    
 0.974
S4RG10_PETMA
Laminin N-terminal domain-containing protein.
  
  
 
0.902
S4RI85_PETMA
Uncharacterized protein.
    
 
 0.754
S4R5M9_PETMA
Uncharacterized protein.
 
     0.718
S4R7V3_PETMA
Transmembrane protein 107.
      
 0.664
NPSR
Neuropeptide S receptor.
      
 0.660
S4RYC7_PETMA
RAR-related orphan receptor B.
      
 0.648
S4R7G1_PETMA
Neogenin 1b.
    
 0.608
S4RAY5_PETMA
Uncharacterized protein.
    
 0.608
S4RB00_PETMA
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.608
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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