STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDC6_PETMADehydrogenase/reductase (SDR family) member 1. (312 aa)    
Predicted Functional Partners:
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.828
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
  
 0.828
S4RHC9_PETMA
3-oxoacyl-ACP synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.792
SLC34A3
Solute carrier family 34 member 3.
    
 0.704
S4RLD8_PETMA
Aminoadipate-semialdehyde dehydrogenase.
  
 0.697
S4R6V5_PETMA
Proliferation-associated 2G4, b.
   
 0.683
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
  
 0.683
S4RRA2_PETMA
Enoyl-CoA delta isomerase 2.
  
 0.683
S4RW13_PETMA
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.668
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
    
 0.662
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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