STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDE3_PETMAUncharacterized protein. (590 aa)    
Predicted Functional Partners:
ESPL1
Extra spindle pole bodies like 1, separase.
    
 0.795
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.748
PPP2R1A
Protein phosphatase 2, regulatory subunit A, beta b.
    
  0.729
S4RYI2_PETMA
Serine/threonine-protein kinase PLK.
   
 0.700
S4RC79_PETMA
Protein kinase domain-containing protein.
    
 0.552
S4RZR2_PETMA
Protein kinase domain-containing protein.
    
 0.552
S4RCG0_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.529
S4RGC5_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.529
S4RNF3_PETMA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.528
S4RW77_PETMA
Cytoskeleton associated protein 5.
   
 
 0.522
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.