STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDE9_PETMAAcylglycerol kinase. (427 aa)    
Predicted Functional Partners:
S4RFK9_PETMA
Translocase of inner mitochondrial membrane 29.
    
 
 0.959
S4RN59_PETMA
Translocase of inner mitochondrial membrane 9 homolog.
    
 
 0.954
S4RID1_PETMA
Translocase of inner mitochondrial membrane 10 homolog (yeast).
    
 
 0.944
S4R779_PETMA
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.877
S4R5F4_PETMA
Neutral ceramidase.
    
 0.876
S4RN87_PETMA
Delta(4)-desaturase, sphingolipid 2.
   
 0.876
S4RRH4_PETMA
Carboxymethylenebutenolidase homolog (Pseudomonas).
    
 0.858
S4RHW1_PETMA
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.856
S4RBV7_PETMA
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.854
S4RLD8_PETMA
Aminoadipate-semialdehyde dehydrogenase.
   
 
 0.842
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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