Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RDF0_PETMADCAF15_WD40 domain-containing protein. (214 aa)    
Predicted Functional Partners:
S4RVX6_PETMA
Damage-specific DNA binding protein 1.
    
 
 0.947
S4RNZ6_PETMA
Cullin 4B; Belongs to the cullin family.
    
 0.923
S4RRJ7_PETMA
CULT domain-containing protein.
     
 0.806
S4RAQ6_PETMA
Ddb1 and cul4 associated factor 11.
     
 0.787
RBM39
RNA binding motif protein 39.
    
 
 0.764
RBM39-2
RNA binding motif protein 39.
    
 
 0.764
S4RWA8_PETMA
Ubiquitin protein ligase E3 component n-recognin 7.
      
 0.596
S4RH86_PETMA
WD repeat domain 21.
    
 0.595
S4RL68_PETMA
Uncharacterized protein.
    
   0.564
S4RFS2_PETMA
Zinc finger E-box binding homeobox 2b.
    
   0.561
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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