STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDF2_PETMAUncharacterized protein. (198 aa)    
Predicted Functional Partners:
S4RTD0_PETMA
Dystrobrevin.
    
 
 0.795
S4RDD9_PETMA
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
 
   
 0.661
S4RP96_PETMA
Catenin (cadherin-associated protein), alpha-like 1.
   
 
 0.512
S4R9W4_PETMA
Nitric oxide synthase 1 (neuronal).
    
 
 0.484
S4RJ43_PETMA
NOS domain-containing protein.
    
 
 0.484
S4RQN0_PETMA
Flavodoxin-like domain-containing protein.
    
 
 0.484
S4RVF6_PETMA
NAD_binding_1 domain-containing protein.
    
 
 0.484
S4R7T6_PETMA
Uncharacterized protein.
    
 
 0.464
S4RC49_PETMA
Uncharacterized protein.
    
 
 0.464
S4RC56_PETMA
ZZ-type domain-containing protein.
    
 
 0.464
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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