Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RDI1_PETMARibosomal modification protein rimK-like family member A. (311 aa)    
Predicted Functional Partners:
S4R7H4_PETMA
N-acetyltransferase 8-like.
     
 0.964
S4R4A8_PETMA
Aspartoacylase (aminocyclase) 3, tandem duplicate 1.
     
 0.941
S4RE81_PETMA
Isocitrate dehydrogenase (NAD(+)) 3 gamma.
    
 0.877
S4RXU5_PETMA
Citrate synthase; Belongs to the citrate synthase family.
    
 0.867
S4RA83_PETMA
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.864
S4RY63_PETMA
Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide).
   
 0.843
S4RJ25_PETMA
Malate dehydrogenase.
    
 0.826
S4RP83_PETMA
Malate dehydrogenase.
    
 0.812
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.807
S4R485_PETMA
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
 0.805
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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