STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDL1_PETMAIntegrator complex subunit 12. (486 aa)    
Predicted Functional Partners:
S4RW63_PETMA
Uncharacterized protein.
    
 0.995
S4RR79_PETMA
Integrator complex subunit 5.
    
 0.993
S4RBI7_PETMA
Uncharacterized protein.
    
 0.982
S4RW18_PETMA
DUF3677 domain-containing protein.
    
 0.982
S4RMG8_PETMA
Lactamase_B domain-containing protein.
   
 0.945
S4RN27_PETMA
Integrator complex subunit 9.
   
 0.943
S4RJ94_PETMA
Uncharacterized protein.
    
 0.941
S4RIJ8_PETMA
Uncharacterized protein.
     
 0.928
S4RZ66_PETMA
SUZ12 polycomb repressive complex 2 subunit a.
   
 0.928
S4RA67_PETMA
Integrator complex subunit 13.
   
 0.926
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.