Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NPHS2NPHS2 stomatin family member, podocin. (233 aa)    
Predicted Functional Partners:
S4RS87_PETMA
SH3 domain-containing protein.
    
 
 0.880
S4RFG9_PETMA
Phosphoinositide phospholipase C.
      
 0.802
S4RXB3_PETMA
WT1 transcription factor a.
    
 
 0.790
SLC4A4
Anion exchange protein.
    
 0.696
S4RGQ5_PETMA
Band_3_cyto domain-containing protein.
    
 0.696
S4RZ63_PETMA
Uncharacterized protein.
    
 0.682
S4R824_PETMA
Uncharacterized protein.
     
 0.677
S4R6E1_PETMA
Olfactomedin-like 2A.
      
 0.670
S4RES1_PETMA
PH domain-containing protein.
    
 0.649
ANLN
Anillin actin binding protein.
    
 0.649
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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