STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RDQ1_PETMACilia and flagella associated protein 53. (487 aa)    
Predicted Functional Partners:
S4RNR9_PETMA
Fibronectin type-III domain-containing protein.
    
 0.950
S4RLY1_PETMA
CAF1-p150_C2 domain-containing protein.
    
 
 0.898
S4RY15_PETMA
Cilia and flagella associated protein 52.
   
 0.892
S4RCP1_PETMA
Uncharacterized protein.
   
 0.865
S4R967_PETMA
SET domain bifurcated histone lysine methyltransferase 1b.
    
 0.850
S4R631_PETMA
EF-hand domain (C-terminal) containing 1.
   
 
 0.841
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.825
TEKT2
Uncharacterized protein.
   
 
 0.777
TEKT2-2
Uncharacterized protein.
   
 
 0.777
S4RIM5_PETMA
Uncharacterized protein.
   
   0.765
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.