STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDQ1_PETMACilia and flagella associated protein 53. (487 aa)    
Predicted Functional Partners:
S4RY15_PETMA
Cilia and flagella associated protein 52.
   
 0.868
S4RCP1_PETMA
Uncharacterized protein.
   
 0.816
S4R631_PETMA
EF-hand domain (C-terminal) containing 1.
   
 
 0.798
S4RIM5_PETMA
Uncharacterized protein.
   
   0.796
TEKT2
Uncharacterized protein.
   
 
 0.796
TEKT2-2
Uncharacterized protein.
   
 
 0.796
S4R4J4_PETMA
Uncharacterized protein.
    
  0.794
S4RLP2_PETMA
Coiled-coil domain containing 173.
   
   0.794
PACRGL
Parkin coregulated like.
    
 
 0.788
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
 0.767
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.