STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RDW8_PETMAProtein tyrosine phosphatase, non-receptor type 23, b. (1884 aa)    
Predicted Functional Partners:
S4RGB0_PETMA
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.995
S4RMS1_PETMA
Uncharacterized protein.
    
 0.994
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
   
 0.968
S4RCZ2_PETMA
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.962
S4RXI6_PETMA
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.962
S4RF48_PETMA
Growth arrest-specific 7a.
   
 0.943
S4R651_PETMA
Zinc finger, FYVE domain containing 9a.
   
 
 0.851
S4RRW6_PETMA
Programmed cell death 6 interacting protein.
    
0.820
S4RQL0_PETMA
UEV domain-containing protein.
   
 0.796
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.767
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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