Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4RDY6_PETMAEndothelial cell-specific molecule 1. (114 aa)    
Predicted Functional Partners:
S4RY22_PETMA
Mesoderm development LRP chaperone.
      
 0.463
S4RLI9_PETMA
O-GlcNAcase like.
      
 0.459
S4R717_PETMA
Uncharacterized protein.
      
 0.458
S4RV22_PETMA
Uncharacterized protein.
     
 0.439
TIMP1
TIMP metallopeptidase inhibitor 1.
    
 
 0.433
S4R9P8_PETMA
Uncharacterized protein.
      
 0.429
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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