Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RE09_PETMALeucine rich repeat containing 8 VRAC subunit Ab. (489 aa)    
Predicted Functional Partners:
S4R935_PETMA
Leucine rich repeat containing 8 VRAC subunit Db.
   
  0.988
S4RCE1_PETMA
Uncharacterized protein.
    
 0.677
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
  
 
  0.571
S4R934_PETMA
Uncharacterized protein.
  
 
  0.563
S4RMY8_PETMA
Leucine-rich repeat containing G protein-coupled receptor 4.
  
 
  0.557
LRRTM4-2
Leucine rich repeat transmembrane neuronal 4.
  
     0.524
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
  
     0.522
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 
 0.512
S4RKJ9_PETMA
Keratocan.
  
     0.508
S4RT36_PETMA
Leucine rich repeat and fibronectin type III domain containing 5a.
  
     0.508
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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