STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RE31_PETMADeoxyribonuclease; Belongs to the DNase I family. (298 aa)    
Predicted Functional Partners:
S4R8K9_PETMA
HDAC_interact domain-containing protein.
    
 0.898
S4R8I5_PETMA
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.846
S4R6C9_PETMA
Non-specific serine/threonine protein kinase.
    
 0.774
TRADD
Tnfrsf1a-associated via death domain.
     
 0.772
S4RFF2_PETMA
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.769
S4RMT3_PETMA
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.769
S4RMT5_PETMA
IKBKB_SDD domain-containing protein.
    
 0.769
S4R779_PETMA
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.761
S4RNY9_PETMA
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
    
  0.758
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.758
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.