Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4RE69_PETMAUncharacterized protein. (345 aa)    
Predicted Functional Partners:
S4RMF5_PETMA
HemK methyltransferase family member 1.
  
 
 0.808
S4RUR2_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.633
S4S0H5_PETMA
Uncharacterized protein.
   
 0.611
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
  
 0.596
S4RN99_PETMA
Pumilio RNA-binding family member 1.
    
   0.580
S4RRG2_PETMA
Pumilio RNA-binding family member 2.
    
   0.580
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
     
 0.569
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
  
 0.553
S4R4M7_PETMA
Uncharacterized protein.
  
  
 0.553
S4RD73_PETMA
Mitochondrial ribosomal protein L35.
    
 0.535
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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