STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RE70_PETMAThioredoxin-related transmembrane protein 1. (131 aa)    
Predicted Functional Partners:
S4RHN5_PETMA
Sulfite oxidase; Belongs to the cytochrome b5 family.
   
 0.913
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 
 0.793
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
  
 
 0.793
S4RKK1_PETMA
Thioredoxin reductase 3.
  
 0.672
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
  
 0.672
S4RBY3_PETMA
Endoplasmic reticulum oxidoreductase beta.
    
 0.660
S4R9T7_PETMA
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 0.657
S4RZW1_PETMA
Si:ch211-274f20.2.
   
 0.642
S4R8T1_PETMA
Peroxiredoxin 3.
  
 0.641
S4RM50_PETMA
DENN domain containing 10.
  
 0.641
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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