Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4REB3_PETMAUncharacterized protein. (179 aa)    
Predicted Functional Partners:
S4RE88_PETMA
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.934
S4RVV1_PETMA
ATP synthase peripheral stalk-membrane subunit b.
    
   0.695
S4RQE6_PETMA
3-hydroxy-3-methylglutaryl-CoA lyase.
      
 0.659
S4RAK5_PETMA
Cytochrome c oxidase assembly homolog 11 (yeast).
      
 0.650
S4RU20_PETMA
Organic cation transporter 2.
    
 
 0.638
S4RGI6_PETMA
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
      
 0.629
S4RQ20_PETMA
Solute carrier family 52 member 3.
      
 0.618
S4RBM9_PETMA
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.603
S4RJ93_PETMA
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.603
S4RA49_PETMA
Si:ch211-214j8.1.
      
 0.599
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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