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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANPEPAminopeptidase. (959 aa)    
Predicted Functional Partners:
S4RNY0_PETMA
Leucine aminopeptidase 3.
  
 0.730
S4R9M4_PETMA
Aspartate aminotransferase.
   
 0.696
S4RAL7_PETMA
Aspartate aminotransferase.
   
 0.696
S4RTN2_PETMA
Zgc:152830.
  
 0.671
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
  
 0.655
S4RKK1_PETMA
Thioredoxin reductase 3.
   
 0.649
S4R9H3_PETMA
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.632
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.632
S4RMK0_PETMA
Uncharacterized protein.
    
 0.630
S4RE84_PETMA
Cysteine dioxygenase.
   
 
  0.617
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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