S4REF1_PETMA protein (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACTIN	S4R8Q7_PETMA	ENSPMAP00000001447	ENSPMAP00000001588	Cactin_mid domain-containing protein.	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	0.895
CACTIN	S4REF1_PETMA	ENSPMAP00000001447	ENSPMAP00000003583	Cactin_mid domain-containing protein.	Uncharacterized protein.	0.890
CACTIN	S4RF13_PETMA	ENSPMAP00000001447	ENSPMAP00000003795	Cactin_mid domain-containing protein.	Small integral membrane protein 29.	0.599
CACTIN	S4RGM6_PETMA	ENSPMAP00000001447	ENSPMAP00000004358	Cactin_mid domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.636
CACTIN	S4RID1_PETMA	ENSPMAP00000001447	ENSPMAP00000004963	Cactin_mid domain-containing protein.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.956
CACTIN	S4RN59_PETMA	ENSPMAP00000001447	ENSPMAP00000006645	Cactin_mid domain-containing protein.	Translocase of inner mitochondrial membrane 9 homolog.	0.952
CACTIN	S4RX37_PETMA	ENSPMAP00000001447	ENSPMAP00000009777	Cactin_mid domain-containing protein.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.807
CACTIN	S4RYZ3_PETMA	ENSPMAP00000001447	ENSPMAP00000010434	Cactin_mid domain-containing protein.	CactinC_cactus domain-containing protein.	0.949
S4R791_PETMA	S4REF1_PETMA	ENSPMAP00000001071	ENSPMAP00000003583	Nuclear transcription factor Y, alpha.	Uncharacterized protein.	0.859
S4R8Q7_PETMA	CACTIN	ENSPMAP00000001588	ENSPMAP00000001447	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Cactin_mid domain-containing protein.	0.895
S4R8Q7_PETMA	S4REF1_PETMA	ENSPMAP00000001588	ENSPMAP00000003583	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Uncharacterized protein.	0.855
S4R8Q7_PETMA	S4RF13_PETMA	ENSPMAP00000001588	ENSPMAP00000003795	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Small integral membrane protein 29.	0.960
S4R8Q7_PETMA	S4RGM6_PETMA	ENSPMAP00000001588	ENSPMAP00000004358	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.986
S4R8Q7_PETMA	S4RID1_PETMA	ENSPMAP00000001588	ENSPMAP00000004963	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.914
S4R8Q7_PETMA	S4RN59_PETMA	ENSPMAP00000001588	ENSPMAP00000006645	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Translocase of inner mitochondrial membrane 9 homolog.	0.947
S4R8Q7_PETMA	S4RX37_PETMA	ENSPMAP00000001588	ENSPMAP00000009777	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.556
S4R8Q7_PETMA	S4RYZ3_PETMA	ENSPMAP00000001588	ENSPMAP00000010434	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	CactinC_cactus domain-containing protein.	0.879
S4R8Q7_PETMA	TIMM22	ENSPMAP00000001588	ENSPMAP00000009086	Translocase of inner mitochondrial membrane 23 homolog a (yeast).	Translocase of inner mitochondrial membrane 22.	0.926
S4REF1_PETMA	CACTIN	ENSPMAP00000003583	ENSPMAP00000001447	Uncharacterized protein.	Cactin_mid domain-containing protein.	0.890
S4REF1_PETMA	S4R791_PETMA	ENSPMAP00000003583	ENSPMAP00000001071	Uncharacterized protein.	Nuclear transcription factor Y, alpha.	0.859