STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4REF9_PETMAIPT/TIG domain-containing protein. (379 aa)    
Predicted Functional Partners:
S4REG2_PETMA
COE1_DBD domain-containing protein.
 
     0.935
S4REP6_PETMA
YOD1 deubiquitinase.
    
   0.678
S4REH5_PETMA
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
    
 
 0.568
S4RJY1_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.554
S4R8Y2_PETMA
Uncharacterized protein.
    
 0.540
S4RUF6_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.540
S4RSL0_PETMA
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
    
   0.478
PPARD
Peroxisome proliferator activated receptor delta.
     
 0.461
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.448
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
    
 0.448
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: medium (60%) [HD]