Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4REH0_PETMASerine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (439 aa)    
Predicted Functional Partners:
S4RQR4_PETMA
LTV1 ribosome biogenesis factor.
   
 0.964
S4R4Q7_PETMA
Uncharacterized protein.
 
  
 0.963
TSR1
TSR1 ribosome maturation factor.
   
 0.942
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.927
S4RJV4_PETMA
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.923
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.904
S4RFX0_PETMA
Partner of NOB1 homolog.
   
 0.903
S4RKD2_PETMA
Uncharacterized protein.
    
  0.903
S4RP88_PETMA
RIO kinase 1 (yeast).
    
 0.898
S4RQT7_PETMA
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
    
 0.871
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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