STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4REH0_PETMASerine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (439 aa)    
Predicted Functional Partners:
S4R4Q7_PETMA
Uncharacterized protein.
 
   
 0.948
S4RQR4_PETMA
LTV1 ribosome biogenesis factor.
   
 0.923
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.865
S4RFM0_PETMA
Uncharacterized protein.
   
 
 0.850
TSR1
TSR1 ribosome maturation factor.
   
 0.847
S4RUR2_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.839
S4RJC2_PETMA
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.836
S4R776_PETMA
Bystin-like.
   
 0.832
S4RFX0_PETMA
Partner of NOB1 homolog.
   
 0.831
S4RKR5_PETMA
Nucleic_acid_bd domain-containing protein.
   
 0.830
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.