STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4REH3_PETMASterile alpha and TIR motif containing 1. (334 aa)    
Predicted Functional Partners:
S4RUX2_PETMA
Uncharacterized protein.
 
     0.931
S4R6J6_PETMA
MYD88 innate immune signal transduction adaptor.
    
 
 0.686
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.623
S4RIK9_PETMA
Transmembrane p24 trafficking protein 7.
    
 0.519
S4RTT6_PETMA
Transmembrane p24 trafficking protein 3.
    
 0.519
S4RA88_PETMA
TNF receptor-associated factor.
    
 0.456
S4RZE6_PETMA
Serine/threonine kinase receptor associated protein.
 
      0.451
S4RNG9_PETMA
Nicotinamide nucleotide adenylyltransferase 2.
    
 
 0.448
S4R4E5_PETMA
TNF receptor-associated factor.
    
 0.443
S4RSL4_PETMA
Nicotinamide-nucleotide adenylyltransferase.
    
 
 0.440
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.