Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4REH5_PETMAUncharacterized protein; Belongs to the fatty acid desaturase type 1 family. (137 aa)    
Predicted Functional Partners:
S4RTF9_PETMA
Elongation of very long chain fatty acids protein.
   
 0.968
S4RW13_PETMA
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.968
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
     
 0.910
S4R5M7_PETMA
Coiled-coil domain containing 57.
  
 
 0.879
S4R7T3_PETMA
PlsC domain-containing protein.
   
 0.827
S4R5V2_PETMA
Uncharacterized protein.
  
 
 0.790
S4R582_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.766
S4RKA7_PETMA
Acyl-CoA synthetase long chain family member 3b.
  
 
 0.752
S4REF9_PETMA
IPT/TIG domain-containing protein.
   
 
 0.738
S4REG2_PETMA
COE1_DBD domain-containing protein.
   
 
 0.738
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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