STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4REN1_PETMANucleotide binding protein 1 (MinD homolog, E. coli). (165 aa)    
Predicted Functional Partners:
S4RZ40_PETMA
Nucleotide binding protein-like.
 
 
   0.915
S4RTF2_PETMA
Glutamine synthetase.
    
 0.885
S4RCY8_PETMA
Carnosine N-methyltransferase 1.
     
 0.852
S4RHC9_PETMA
3-oxoacyl-ACP synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    0.846
S4REM5_PETMA
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
    
 0.827
S4RP43_PETMA
Uncharacterized protein.
     
 0.827
S4RZL9_PETMA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.827
S4R6I4_PETMA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.823
S4R9I6_PETMA
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.816
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
  
 
 0.816
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.