STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RES9_PETMATetratricopeptide repeat domain 7B. (863 aa)    
Predicted Functional Partners:
S4RUP9_PETMA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.976
S4RQT2_PETMA
Uncharacterized protein.
    
 
 0.913
S4RXJ3_PETMA
Uncharacterized protein.
   
 
 0.770
S4RXK5_PETMA
Uncharacterized protein.
   
 
 0.770
FAM126B
Uncharacterized protein.
    
 
 0.679
FAM126B-2
Uncharacterized protein.
    
 
 0.679
S4RVK1_PETMA
SAC domain-containing protein.
    
 
 0.499
S4RZU1_PETMA
Uncharacterized protein.
    
 
 0.499
S4R5S1_PETMA
Transmembrane p24 trafficking protein 6.
      
 0.485
S4R7S4_PETMA
Glutaminyl-peptide cyclotransferase.
      
 0.480
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.