Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
S4REV1_PETMAUbiquilin 4. (582 aa)    
Predicted Functional Partners:
S4RNL4_PETMA
WWE domain-containing protein.
    
 0.957
S4RDQ3_PETMA
Proteasome 26S subunit, non-ATPase 4a.
   
 
 0.936
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.933
UBB
Ubiquitin B.
    
 0.919
S4RGQ0_PETMA
Proteasome 26S subunit, non-ATPase 14.
   
 0.916
S4RVB6_PETMA
Proteasome 26S subunit, non-ATPase 13.
   
 0.913
S4RMF7_PETMA
UBX domain protein 7.
    
 0.912
S4RHU9_PETMA
Proteasome 26S subunit, non-ATPase 2.
   
 0.910
S4RNT3_PETMA
Proteasome 26S subunit, non-ATPase 6.
   
 0.910
S4RUR8_PETMA
Ubiquitin-like domain-containing protein.
     
 
0.900
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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