STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RF44_PETMAUncharacterized protein. (262 aa)    
Predicted Functional Partners:
S4RYA9_PETMA
TORC_C domain-containing protein.
 
  
  0.943
S4RGA3_PETMA
TORC_C domain-containing protein.
 
     0.926
ATF6B
Activating transcription factor 6 beta.
    
 0.720
S4RAB0_PETMA
Serine/threonine-protein phosphatase.
    
 0.713
S4RDR8_PETMA
TAFH domain-containing protein.
    
 0.694
S4RS76_PETMA
RNA binding motif protein 22.
    
 0.668
S4RJD3_PETMA
E1A binding protein p300 a.
    
 0.660
S4RM71_PETMA
Uncharacterized protein.
    
 0.660
S4RUA6_PETMA
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.648
TTC6
Tetratricopeptide repeat domain 6.
    
 0.648
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.