STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB1ATP binding cassette subfamily B member 1. (1061 aa)    
Predicted Functional Partners:
S4RXM0_PETMA
ABC transmembrane type-1 domain-containing protein.
 
     0.942
S4RYT4_PETMA
ABC transmembrane type-1 domain-containing protein.
 
    
0.914
S4R7R6_PETMA
Uncharacterized protein.
   
 0.692
S4RLH8_PETMA
SCP2 domain-containing protein.
   
 0.692
S4RDR8_PETMA
TAFH domain-containing protein.
    
 0.690
S4R7B1_PETMA
Peptidase_M16 domain-containing protein.
   
 0.683
S4R7Q9_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.683
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
  
 0.682
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.677
S4RMV4_PETMA
Lipin_mid domain-containing protein.
    
 0.677
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (22%) [HD]