STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFX1Nuclear transcription factor, X-box binding 1. (790 aa)    
Predicted Functional Partners:
S4R9E2_PETMA
HECT domain-containing protein.
     
 0.809
S4RZU8_PETMA
Ubiquitin protein ligase E3A.
     
 0.804
S4RK35_PETMA
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.713
S4RN46_PETMA
Peptidylprolyl isomerase.
    
 
 0.684
S4RXU0_PETMA
Peptidylprolyl isomerase.
    
 
 0.684
S4R7M9_PETMA
Uncharacterized protein.
    
   0.673
S4RAC1_PETMA
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.673
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.673
S4RJC2_PETMA
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.673
S4RJV4_PETMA
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.673
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (26%) [HD]