STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFA7_PETMADENN/MADD domain containing 4A. (1704 aa)    
Predicted Functional Partners:
S4RBC8_PETMA
RAB8A, member RAS oncogene family.
    
 0.537
S4RPZ5_PETMA
RAB15, member RAS oncogene family.
    
 0.537
S4RRN1_PETMA
Uncharacterized protein.
    
 0.537
S4RXL7_PETMA
RAB8A, member RAS oncogene family.
    
 0.537
S4RZH8_PETMA
Uncharacterized protein.
    
 0.537
S4RE74_PETMA
Phosphotriesterase related.
    
 0.455
S4R487_PETMA
Uncharacterized protein.
    
 0.437
S4R5A0_PETMA
Uncharacterized protein.
    
 0.437
S4R9B0_PETMA
RAS and EF-hand domain containing.
    
 0.437
S4RBK2_PETMA
RAB40B, member RAS oncogene family.
    
 0.437
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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