STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFD9_PETMAUncharacterized protein. (198 aa)    
Predicted Functional Partners:
S4RTD3_PETMA
SET domain-containing protein.
 
      0.818
S4RFV7_PETMA
SH3 and PX domains 2Aa.
    
 0.628
S4RW98_PETMA
Uncharacterized protein.
    
 0.580
S4R967_PETMA
SET domain bifurcated histone lysine methyltransferase 1b.
    
 0.570
S4RJX7_PETMA
Lysine methyltransferase 5Ab.
    
 0.570
S4RFP0_PETMA
SET domain-containing protein.
     
 0.535
S4R514_PETMA
NADPH oxidase, EF-hand calcium binding domain 5.
   
 0.488
S4RBZ7_PETMA
Dual oxidase.
   
 0.488
S4RC11_PETMA
Dual oxidase.
   
 0.488
S4RC19_PETMA
Dual oxidase.
   
 0.488
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.