STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFM8_PETMAF5/8 type C domain-containing protein. (161 aa)    
Predicted Functional Partners:
S4RMH5_PETMA
Uncharacterized protein.
 
    
 0.903
S4RYU6_PETMA
Plastocyanin-like domain-containing protein.
 
 
    0.900
S4RLM2_PETMA
Uncharacterized protein; Belongs to the multicopper oxidase family.
 
 
    0.899
S4RP12_PETMA
Plastocyanin-like domain-containing protein; Belongs to the multicopper oxidase family.
 
 
    0.892
S4RDK2_PETMA
Ferrochelatase; Belongs to the ferrochelatase family.
   
 
 0.691
S4S013_PETMA
Frataxin.
     
 0.662
S4RWC0_PETMA
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
    
 0.652
COX2
Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]
     
 0.650
S4RLD8_PETMA
Aminoadipate-semialdehyde dehydrogenase.
     
 0.632
S4RPY2_PETMA
Cytochrome c-1.
     
 0.623
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.