Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSX1Msh homeobox 1. (145 aa)    
Predicted Functional Partners:
TBP
TATA box binding protein.
    
   0.825
S4RRB5_PETMA
Necdin-like 2.
    
 
 0.755
S4RGA1_PETMA
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.744
S4R8T9_PETMA
Bone morphogenetic protein 2.
    
 0.718
S4RY62_PETMA
Bone morphogenetic protein 2.
    
 0.718
S4S1Q3_PETMA
Paired box 9.
    
 
 0.715
S4RRD9_PETMA
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
     
 0.662
S4R4Q8_PETMA
TGFb_propeptide domain-containing protein.
    
 0.654
S4RTR7_PETMA
TGF_BETA_2 domain-containing protein.
    
 0.654
S4RKN6_PETMA
Uncharacterized protein.
    
 
 0.648
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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