STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFQ9_PETMAAminolevulinate, delta-, synthase 2. (298 aa)    
Predicted Functional Partners:
S4RZQ3_PETMA
Preseq_ALAS domain-containing protein.
 
      0.900
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 
 0.871
S4RTA1_PETMA
Beta_elim_lyase domain-containing protein.
    
 0.859
S4RX62_PETMA
Aminotran_5 domain-containing protein.
    
 0.853
S4RC94_PETMA
Dimethylglycine dehydrogenase.
  
 
 0.850
S4RYJ6_PETMA
Sorbitol dehydrogenase.
  
 
 0.844
S4RDJ4_PETMA
DAO domain-containing protein.
    
 0.834
S4RMI7_PETMA
D-amino-acid oxidase, tandem duplicate 2.
    
 0.834
S4RS55_PETMA
Zgc:172341.
    
 0.834
S4RA84_PETMA
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.831
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.